When generating western latin glyphs combining with diacritics, my …comb diacritics with anchors are not in place as shown in the diacritics cloud preview. See image. I have set top anchors on the alphabet and _top anchors on all …comb accents. Thanks for the help!
What are the glyph names being used?
Can you check if auto alignment is disabled in font info > other?
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Auto alignment was disabled. Now it is working 
Thank you very much for that hint!