Text Overlapping

For some reason when I exported my font and opened it on InDesign some overlapping occurs. When I exported it the option Remove Overlapping was checked and still it appears. However, it only appears when I zoom out at a certain amount. Here are two screen shots. The size of the font is the same but when I zoom out overlapping occurs. Can anyone have a solution for this?

Can you check the path direction of all paths bin those glyphs? In the ā€˜Eā€™, all paths have to be counter clock wise.